SMILE: Multiscale dissection of spatial heterogeneity by integrating multi-slice spatial and single-cell transcriptomics
Contents:
- Overview
- Installation guide
- Tutorial 1: Integrating three simulated slices by SMILE
- Tutorial 2: Integrating adjacent DLPFC slices
- Tutorial 2 plus: Integrating adjacent DLPFC slices with one slice has annotation
- Tutorial 3: Integrating of anterior and posterior sections of mouse brain
- Tutorial 4: Integrating SRT and scRNA-seq data of normal skin and psoriasis
- Tutorial 5: Integrating MOB data from Stereo-seq and Slide-seqV2
- Datasets
- Support
Citation
Multiscale dissection of spatial heterogeneity by integrating multi-slice spatial and single-cell transcriptomics